Agenda for the Day 4: Workflow Development

Time (UTC)	Programme
11.00 - 11.30	Welcome and Preamble to Building our Workflow
11:10 - 12.00	Building A Nextflow Script
12.00 - 12.10	Short break
12:10 - 12:40	Building A CWL Script
12.40 - 11.50	Shared elements across workflow languages
12.50 - 13:00	Wrap up and overview of next days topics

Additional Resources

• Authenticating on Cavatica
• Common Workflow Language
• Common Workflow Langage How-to
• Nextflow
• Nextflow Basic pipeline with detail description of the file
• Nextflow Blast Example
• Nextflow Community Based Pipelines
• Nextflow Mixing Programming Languages In The Workflow